BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024C05SP1|AL428186
(1002 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1716 1925 0.0
>3x_Contig1716
Length = 19108
Score = 1925 bits (963), Expect = 0.0
Identities = 983/998 (98%)
Strand = Plus / Plus
Query: 1 atctggtaaccatcccctttatagtactttttcacaccgtggaatcgtagataatagtac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5968 atctggtaaccatcccctttatagtactttttcacaccgtggaatcgtagataatagtac 6027
Query: 61 actgccatggtaaagattggacaagtaaatggtgattggraattgggaacaagaacaaaa 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 6028 actgccatggtaaagattggacaagtaaatggtgattggaaattgggaacaagaacaaaa 6087
Query: 121 ttaggtttactagaatgcgccaatccacatttaccattttcatcatccaatatacattgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6088 ttaggtttactagaatgcgccaatccacatttaccattttcatcatccaatatacattgt 6147
Query: 181 aaatctttcaacgacacagtagttctgtcttcgaaagacacattcgtattgaatttccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6148 aaatctttcaacgacacagtagttctgtcttcgaaagacacattcgtattgaatttccat 6207
Query: 241 tggaaatccaagagtagttttagcttatcctggcaagtcttgaagtgttttgattgtkag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 6208 tggaaatccaagagtagttttagcttatcctggcaagtcttgaagtgttttgattgtaag 6267
Query: 301 gratccgtactgggattccataaattgatagaratcttttgtaagatagcaataacatta 360
| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 6268 gaatccgtactgggattccataaattgatagaaatcttttgtaagatagcaataacatta 6327
Query: 361 gaataatcaaactctaacaatttcactagaccgtataaccgttgctgtaatacaagaaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6328 gaataatcaaactctaacaatttcactagaccgtataaccgttgctgtaatacaagaaca 6387
Query: 421 tcgttattttcgatgtccaaagcacgagagaaccaaatcatggcgtcacaagtaggtaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6388 tcgttattttcgatgtccaaagcacgagagaaccaaatcatggcgtcacaagtaggtaat 6447
Query: 481 ggrtccttcgcgatatcatcatgcgaagaantatatttgacaatgtacttttgagacaag 540
|| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 6448 ggatccttcgcgatatcatcatgcgaagcaatatatttgacaatgtacttttgagacaag 6507
Query: 541 aaaagtttcaggtctgcgccggtgagatcgggcatcgttttcagccattctgtgtatttr 600
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6508 aaaagtttcaggtctgcgccggtgagatcgggcatcgttttcagccattctgtgtattta 6567
Query: 601 tgccatatgctgcggtatagatgagctgttcgtgtaggcaattctttcaaaagagaatca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6568 tgccatatgctgcggtatagatgagctgttcgtgtaggcaattctttcaaaagagaatca 6627
Query: 661 agtttggacattcaacttgaggaaaacaggagcctatattagcttttcgccagcaacctg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6628 agtttggacattcaacttgaggaaaacaggagcctatattagcttttcgccagcaacctg 6687
Query: 721 aaaccaaccaactccataagtatcacttcctattgttaatggttgttgtttttattatta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6688 aaaccaaccaactccataagtatcacttcctattgttaatggttgttgtttttattatta 6747
Query: 781 ttatggatgttaaaaaaaagaactacaatacgcgaaagacaactgttctctttttttttt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6748 ttatggatgttaaaaaaaagaactacaatacgcgaaagacaactgttctctttttttttt 6807
Query: 841 tttttttttttgdggggrgcgaaactgagaagagcatgcmtcttggaaaaaaaaaacagt 900
|||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 6808 tttttttttttgaggggagcgaaactgagaagagcatgcatcttggaaaaaaaaaacagt 6867
Query: 901 cacgtgaacataaaagrrgaccacctcaaaaactccmtgattgtgctgcccttcgtcccg 960
|||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 6868 cacgtgaacataaaagaagaccacctcaaaaactccatgattgtgctgcccttcgtcccg 6927
Query: 961 atccaaatacgaaccgctaatgcmccccaccagagagg 998
||||||||||||||||||||||| ||||||||||||||
Sbjct: 6928 atccaaatacgaaccgctaatgcaccccaccagagagg 6965
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 24,698
Number of Sequences: 1807
Number of extensions: 24698
Number of successful extensions: 4392
Number of sequences better than 1.0e-20: 1
length of query: 1002
length of database: 10,358,551
effective HSP length: 16
effective length of query: 986
effective length of database: 10,329,639
effective search space: 10185024054
effective search space used: 10185024054
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)